Keerthiraju Ethiraju Ravichandran

A spiritual through meditation person, a wanderer and northern lights hunter. Food-lover who enjoy making Indian sweets and spicy foods. A die hard Manchester United fan, movie freak, purveyor of scientific and historical facts, & Researcher. I live in adage “Work hard-party harder”, a Jedi in lab and a gamer after-hours. A keen babysitter.

I hold a Bachelors of Technology in Chemical Engineering from Anna University, India and a Master of Research in Biosciences (Sustainable Bioenergy) from The University of Nottingham, UK.

Research Project

I work on the project entitled “tRNA Modifications in Human Diseases-The structural and functional consequences of Urmylation in response to Oxidative stress.”. The prime aim of the project is to study the structural and functional consequences of urmylation on Ahp1 and the Elongator complex during oxidative stress response. The decisive aim is to crystallize urmylated- Ahp1/Elp/Ncs2/Ncs6 and/or urmylated-Ncs2-Ncs6, in case urmylation permits Ncs2/Ncs6 heterodimerization. I also hope to understand the nature of these ancient post-translational amendments, that stand at the interface amid prokaryotic sulfur relay systems and the eukaryotic ubiquitination pathway. Therefore, I aim to establish and optimize urmylation in vitro, recapitulate the regulatory networks under stress conditions and identify components that confer substrate specificity. The anticipated outcomes of this research work would afford profound molecular perceptions in to how urmylation auto-regulates Ahp1, Elongator, Uba4/Urm1-pathways and respective stress signaling pathways under oxidative stress conditions.

Awards during PhD

Key Conferences and Workshop during PhD

  • Oral talk at 24th Heart of Europe Bio-Crystallography meeting, Sep 2022, Czech Republic.
  • Poster Presentation at EMBO Workshop 2022 – Ubiquitin and ubiquitin-like proteins in health and disease. September 2022, Cavtat, Croatia.
  • Flash talk at EMBO YIP RNA and Structural Biology sectoral meeting, September 2020. (Online)
  • Poster presentation at the EMBO Workshop 2019 – The ubiquitin system: Biology mechanisms and roles in disease. September 2019, Cavtat, Croatia.

Publications during PhD

  1. Ravichandran KE, Kaduhr L, Rabian BS, Shvetsova E, Sokołowski M, Krutyhołowa R, Kwasna D, Brachmann C, Lin S, Perez SG, Wilk P, Kösters M, Grudnik P, Jankowska U, Leidel SA, Schaffrath R and Glatt S*. E2/E3-independent ubiquitin-like protein conjugation by Urm1 is directly coupled to cysteine persulfidation, Sep 2022. DOI: 10.15252/embj.2022111318
  2. Pabis M#, Termathe M#, Ravichandran KE#, Kienast SD, Krutyhołowa R, Sokołowski M, Jankowska U, Grudnik P, Leidel SA* and Glatt S*. Molecular basis for the bifunctional Uba4-Urm1 sulfur relay system in tRNA thiolation and ubiquitin-like conjugation. The EMBO Journal, Sep 2020. #These authors contributed equally DOI: 10.15252/embj.2020105087
  3. Kaduhr L, Brachmann C, Ravichandran KE, West JD, Glatt S, Schaffrath R*. Urm1, not quite like the other ubiquitin-like modifiers. Microbial Cell, Nov 2021. DOI: 10.15698/mic2021.11.763
  4. Brachmann C, Kaduhr L, Jüdes A, Ravichandran KE, West JD, Glatt S and Schaffrath R*. Redox requirements for ubiquitin-like urmylation of Ahp1, a 2-Cys peroxiredoxin from yeast. Redox Biology, Jan 2020. DOI: 10.1016/j.redox.2020.101438
  5. Hawer H#, Hammermeister A#, Ravichandran KE#, Glatt S, Schaffrath R, and Klassen R*. Roles of Elongator Dependent tRNA Modification Pathways in Neurodegeneration and Cancer. Genes, Review, Dec 2018. #These authors contributed equally DOI: 10.3390/genes10010019